Rhizorhabdus sp000971055
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Rhizorhabdus; s__Rhizorhabdus sp000971055
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomonas; s__Sphingomonas sp. SRS2
NCBI Strain Identifiers SRS2
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 1.37%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 168
N50 Contigs 59,796 bp
Longest Contig 189,922 bp
Scaffold Count 168
N50 Scaffolds 59,796 bp
Longest Scaffold 189,922 bp
Genome Size 4,631,488 bp
Protein Count 4,731
Coding Density 89.40%
GC Percentage 63.92%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name SRS2_1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03452277
Country United Kingdom: Warwickshire; Deep Slade site E6
Date 2015-4-8
Genbank Assembly Accession GCA_000971055.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Isoproturon-treated agricultural soil
Latitude Longitude None
Molecule Count N/A
CDS Count 4,645
Refseq Category na
Seq Rel Date 2015/04/08
Spanned Gaps 0
Species Taxid 133190
SSU Count 1
Submitter ENVS, Aarhus University
Taxid 133190
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LARW00000000.1