Methanosarcina mazei
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Halobacteriota; c__Methanosarcinia; o__Methanosarcinales; f__Methanosarcinaceae; g__Methanosarcina; s__Methanosarcina mazei
Filtered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Methanomicrobia; o__Methanosarcinales; f__Methanosarcinaceae; g__Methanosarcina; s__Methanosarcina mazei
Unfiltered NCBI Taxonomy d__Archaea; p__Euryarchaeota; x__Stenosarchaea group; c__Methanomicrobia; o__Methanosarcinales; f__Methanosarcinaceae; g__Methanosarcina; s__Methanosarcina mazei; x__Methanosarcina mazei S-6
NCBI Strain Identifiers S-6
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (69 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.65%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 4,142,816 bp
Longest Contig 4,142,816 bp
Scaffold Count 1
N50 Scaffolds 4,142,816 bp
Longest Scaffold 4,142,816 bp
Genome Size 4,142,816 bp
Protein Count 3,558
Coding Density 76.24%
GC Percentage 41.42%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM97020v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03074583
Country None
Date 2015-4-7
Genbank Assembly Accession GCA_000970205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 3,483
Refseq Category representative genome
Seq Rel Date 2015/04/07
Spanned Gaps 0
Species Taxid 2209
SSU Count 3
Submitter University of Illinois at Urbana-Champaign
Taxid 213585
Total Gap Length 0
Translation Table 11
tRNA Count (total) 57
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None