Parabacteroides gordonii
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Tannerellaceae; g__Parabacteroides; s__Parabacteroides gordonii
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Tannerellaceae; g__Parabacteroides; s__Parabacteroides gordonii
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Tannerellaceae; g__Parabacteroides; s__Parabacteroides gordonii; x__Parabacteroides gordonii MS-1
NCBI Strain Identifiers MS-1
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (4 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.62%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 3
23S Count 4
tRNA Count 19
Contig Count 38
N50 Contigs 473,171 bp
Longest Contig 1,254,003 bp
Scaffold Count 8
N50 Scaffolds 4,481,443 bp
Longest Scaffold 4,481,443 bp
Genome Size 6,793,348 bp
Protein Count 5,353
Coding Density 90.30%
GC Percentage 44.43%
Ambiguous Bases 1
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Para_gord_MS-1_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03383453
Country None
Date 2015-4-7
Genbank Assembly Accession GCA_000969825.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,309
Refseq Category na
Seq Rel Date 2015/04/07
Spanned Gaps 30
Species Taxid 574930
SSU Count 4
Submitter Broad Institute
Taxid 1203610
Total Gap Length 37576
Translation Table 11
tRNA Count (total) 66
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AQHW00000000.1