Clostridium butyricum
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium butyricum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium sp. IBUN22A
NCBI Strain Identifiers IBUN22A
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006742065.1)
Genome Characteristics
CheckM Completeness 99.12%
CheckM Contamination 0.09%
CheckM Strain Heterogeneity 100.0
5S Count 5
16S Count 3
23S Count 1
tRNA Count 19
Contig Count 208
N50 Contigs 41,410 bp
Longest Contig 194,059 bp
Scaffold Count 208
N50 Scaffolds 41,410 bp
Longest Scaffold 194,059 bp
Genome Size 4,607,385 bp
Protein Count 4,362
Coding Density 84.57%
GC Percentage 28.66%
Ambiguous Bases N/A
GTDB representative GCA_006742065.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ClosIBUN22Av1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02924069
Country Colombia
Date 2015-4-2
Genbank Assembly Accession GCA_000968245.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Potato soil
Latitude Longitude None
Molecule Count N/A
CDS Count 4,163
Refseq Category na
Seq Rel Date 2015/04/02
Spanned Gaps 0
Species Taxid 1523155
SSU Count 4
Submitter Universidad Nacional de Colombia
Taxid 1523155
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JZWE00000000.1