Paracoccus sp000967825
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus; s__Paracoccus sp000967825
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus; s__Paracoccus sp. 228
NCBI Strain Identifiers 228
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_004010775.1)
Genome Characteristics
CheckM Completeness 99.39%
CheckM Contamination 0.66%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 4
23S Count 3
tRNA Count 19
Contig Count 39
N50 Contigs 415,484 bp
Longest Contig 693,267 bp
Scaffold Count 32
N50 Scaffolds 693,267 bp
Longest Scaffold 1,115,499 bp
Genome Size 4,131,609 bp
Protein Count 3,949
Coding Density 88.85%
GC Percentage 66.33%
Ambiguous Bases 434
GTDB representative GCA_004010775.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM96782v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03287307
Country Poland: Baltic Sea; Gulf of Gdansk
Date 2015-2-23
Genbank Assembly Accession GCA_000967825.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source brackish surface water
Latitude Longitude 54.5019 N 18.5594 E
Molecule Count N/A
CDS Count 3,908
Refseq Category na
Seq Rel Date 2015/02/23
Spanned Gaps 7
Species Taxid 1192054
SSU Count 4
Submitter University of Gdansk
Taxid 1192054
Total Gap Length 13420
Translation Table 11
tRNA Count (total) 51
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JYGY00000000.1