Flavobacterium sp000967805
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium sp000967805
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium sp. 316
NCBI Strain Identifiers 316
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.65%
CheckM Contamination 0.35%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 48
N50 Contigs 238,855 bp
Longest Contig 537,004 bp
Scaffold Count 17
N50 Scaffolds 537,004 bp
Longest Scaffold 787,447 bp
Genome Size 3,971,755 bp
Protein Count 3,608
Coding Density 88.42%
GC Percentage 29.30%
Ambiguous Bases 226
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM96780v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03287308
Country Poland: Baltic Sea; Gulf of Gdansk
Date 2015-2-24
Genbank Assembly Accession GCA_000967805.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source brackish surface water
Latitude Longitude 54.33 N 18.39 E
Molecule Count N/A
CDS Count 3,564
Refseq Category na
Seq Rel Date 2015/02/24
Spanned Gaps 31
Species Taxid 1603293
SSU Count 3
Submitter University of Gdansk
Taxid 1603293
Total Gap Length 33370
Translation Table 11
tRNA Count (total) 51
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JYGZ00000000.1