Pseudorhizobium flavum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Pseudorhizobium; s__Pseudorhizobium flavum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Rhizobium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; x__Rhizobium/Agrobacterium group; g__Rhizobium; s__Rhizobium sp. NT-26
NCBI Strain Identifiers NT-26
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002000045.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.78%
CheckM Strain Heterogeneity 50.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 3
N50 Contigs 4,239,731 bp
Longest Contig 4,239,731 bp
Scaffold Count 3
N50 Scaffolds 4,239,731 bp
Longest Scaffold 4,239,731 bp
Genome Size 4,577,425 bp
Protein Count 4,453
Coding Density 89.84%
GC Percentage 61.85%
Ambiguous Bases N/A
GTDB representative GCA_002000045.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM96742v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3283108
Country None
Date 2012-12-17
Genbank Assembly Accession GCA_000967425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 3
CDS Count 4,390
Refseq Category na
Seq Rel Date 2012/12/17
Spanned Gaps 0
Species Taxid 1125847
SSU Count 3
Submitter Genoscope CEA
Taxid 1125847
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None