Bacteroides fragilis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis
NCBI Strain Identifiers BOB25
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000025985.1)
Genome Characteristics
CheckM Completeness 99.26%
CheckM Contamination 0.12%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 1
N50 Contigs 5,282,232 bp
Longest Contig 5,282,232 bp
Scaffold Count 1
N50 Scaffolds 5,282,232 bp
Longest Scaffold 5,282,232 bp
Genome Size 5,282,232 bp
Protein Count 4,392
Coding Density 88.84%
GC Percentage 43.19%
Ambiguous Bases N/A
GTDB representative GCA_000025985.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM96578v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03420872
Country Russia: Saint Petersburg
Date 2015-3-30
Genbank Assembly Accession GCA_000965785.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source human stool sample
Latitude Longitude None
Molecule Count 1
CDS Count 4,592
Refseq Category na
Seq Rel Date 2015/03/30
Spanned Gaps 0
Species Taxid 817
SSU Count 6
Submitter FSBIS SRI PCM FMBA of Russia
Taxid 817
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None