Anaplasma phagocytophilum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Anaplasmataceae; g__Anaplasma; s__Anaplasma phagocytophilum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Anaplasmataceae; g__Anaplasma; s__Anaplasma phagocytophilum
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Anaplasmataceae; g__Anaplasma; x__phagocytophilum group; s__Anaplasma phagocytophilum; x__Anaplasma phagocytophilum str. Webster
NCBI Strain Identifiers Webster
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (27 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.57%
CheckM Contamination 3.5%
CheckM Strain Heterogeneity 90.91
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1
N50 Contigs 1,479,407 bp
Longest Contig 1,479,407 bp
Scaffold Count 1
N50 Scaffolds 1,479,407 bp
Longest Scaffold 1,479,407 bp
Genome Size 1,479,407 bp
Protein Count 1,258
Coding Density 71.92%
GC Percentage 41.64%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM96468v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02666091
Country USA
Date 2015-3-27
Genbank Assembly Accession GCA_000964685.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,137
Refseq Category na
Seq Rel Date 2015/03/27
Spanned Gaps 0
Species Taxid 948
SSU Count 1
Submitter IGS
Taxid 1359162
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LANS00000000.1