Comamonas thiooxydans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Comamonas; s__Comamonas thiooxydans
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Comamonadaceae; g__Comamonas; s__Comamonas thiooxydans
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Comamonadaceae; g__Comamonas; s__Comamonas thiooxydans
NCBI Strain Identifiers DSM 17888
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (22 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.85%
CheckM Contamination 0.54%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 43
N50 Contigs 370,952 bp
Longest Contig 661,539 bp
Scaffold Count 43
N50 Scaffolds 370,952 bp
Longest Scaffold 661,539 bp
Genome Size 5,244,861 bp
Protein Count 4,757
Coding Density 87.88%
GC Percentage 61.60%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM96454v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00019661
Country None
Date 2015-3-21
Genbank Assembly Accession GCA_000964545.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,740
Refseq Category na
Seq Rel Date 2015/03/21
Spanned Gaps 0
Species Taxid 363952
SSU Count 1
Submitter National Institute of Technology and Evaluation
Taxid 363952
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BBVD00000000.1