Acetobacter indonesiensis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Acetobacter; s__Acetobacter indonesiensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Acetobacter; s__Acetobacter indonesiensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Acetobacter; s__Acetobacter indonesiensis; x__Acetobacter indonesiensis 5H-1
NCBI Strain Identifiers 5H-1
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.5%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 183
N50 Contigs 139,519 bp
Longest Contig 360,736 bp
Scaffold Count 181
N50 Scaffolds 139,519 bp
Longest Scaffold 360,736 bp
Genome Size 3,416,768 bp
Protein Count 3,149
Coding Density 88.57%
GC Percentage 53.91%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM96394v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00036632
Country None
Date 2015-3-21
Genbank Assembly Accession GCA_000963945.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,073
Refseq Category representative genome
Seq Rel Date 2015/03/21
Spanned Gaps 2
Species Taxid 104101
SSU Count 1
Submitter Kinki University
Taxid 1231340
Total Gap Length 20
Translation Table 11
tRNA Count (total) 42
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BAMW00000000.1