Streptococcus salivarius
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
NCBI Strain Identifiers UC3162
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000785515.1)
Genome Characteristics
CheckM Completeness 99.9%
CheckM Contamination 0.15%
CheckM Strain Heterogeneity 0.0
5S Count 10
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 23
N50 Contigs 116,758 bp
Longest Contig 370,424 bp
Scaffold Count 23
N50 Scaffolds 116,758 bp
Longest Scaffold 370,424 bp
Genome Size 2,164,807 bp
Protein Count 1,946
Coding Density 86.34%
GC Percentage 40.09%
Ambiguous Bases N/A
GTDB representative GCA_000785515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM96326v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03334908
Country USA: New York; Buffalo
Date 2015-3-25
Genbank Assembly Accession GCA_000963265.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source oral cavity
Latitude Longitude None
Molecule Count N/A
CDS Count 1,960
Refseq Category na
Seq Rel Date 2015/03/25
Spanned Gaps 0
Species Taxid 1304
SSU Count 8
Submitter University at Buffalo
Taxid 1304
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JYOY00000000.1