Salmonella enterica
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Heidelberg; x__Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN00323
NCBI Strain Identifiers CFSAN00323
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 2
23S Count 3
tRNA Count 18
Contig Count 116
N50 Contigs 83,060 bp
Longest Contig 315,007 bp
Scaffold Count 116
N50 Scaffolds 83,060 bp
Longest Scaffold 315,007 bp
Genome Size 4,737,336 bp
Protein Count 4,523
Coding Density 87.65%
GC Percentage 52.12%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM96269v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01088045
Country USA: PA
Date 2015-3-24
Genbank Assembly Accession GCA_000962695.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source stool
Latitude Longitude None
Molecule Count N/A
CDS Count 4,772
Refseq Category na
Seq Rel Date 2015/03/24
Spanned Gaps 0
Species Taxid 28901
SSU Count 2
Submitter FDA
Taxid 1182165
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AMOL00000000.1