Salmonella enterica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Heidelberg; x__Salmonella enterica subsp. enterica serovar Heidelberg str. 632675-24
NCBI Strain Identifiers 632675-24
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 99.71%
CheckM Contamination 0.92%
CheckM Strain Heterogeneity 50.0
5S Count 6
16S Count 2
23S Count 4
tRNA Count 19
Contig Count 62
N50 Contigs 165,267 bp
Longest Contig 369,122 bp
Scaffold Count 62
N50 Scaffolds 165,267 bp
Longest Scaffold 369,122 bp
Genome Size 4,747,033 bp
Protein Count 4,492
Coding Density 87.67%
GC Percentage 52.09%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM96208v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01087977
Country USA: IA
Date 2015-3-24
Genbank Assembly Accession GCA_000962085.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source environmental
Latitude Longitude None
Molecule Count N/A
CDS Count 4,775
Refseq Category na
Seq Rel Date 2015/03/24
Spanned Gaps 0
Species Taxid 28901
SSU Count 2
Submitter FDA
Taxid 1054948
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AMMA00000000.1