Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas citri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas citri
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; x__Xanthomonas citri group; s__Xanthomonas citri; x__Xanthomonas citri pv. citri
NCBI Strain Identifiers gd2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002019225.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 3
N50 Contigs 5,125,124 bp
Longest Contig 5,125,124 bp
Scaffold Count 3
N50 Scaffolds 5,125,124 bp
Longest Scaffold 5,125,124 bp
Genome Size 5,223,747 bp
Protein Count 4,429
Coding Density 85.90%
GC Percentage 64.78%
Ambiguous Bases N/A
GTDB representative GCA_002019225.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM96135v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02911834
Country China: Guangdong
Date 2015-03-24
Genbank Assembly Accession GCA_000961355.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source citrus infected tissue
Latitude Longitude None
Molecule Count 3
CDS Count 4,626
Refseq Category na
Seq Rel Date 2015/03/24
Spanned Gaps 0
Species Taxid 346
SSU Count 2
Submitter Citrus Research and Education center, Univerisity of Florida
Taxid 611301
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None