Listeria monocytogenes_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes_B
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers 4KSM
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000307025.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.46%
CheckM Strain Heterogeneity 100.0
5S Count 5
16S Count 3
23S Count 2
tRNA Count 20
Contig Count 33
N50 Contigs 246,975 bp
Longest Contig 348,612 bp
Scaffold Count 33
N50 Scaffolds 246,975 bp
Longest Scaffold 348,612 bp
Genome Size 3,020,119 bp
Protein Count 2,969
Coding Density 90.00%
GC Percentage 37.90%
Ambiguous Bases 15
GTDB representative GCA_000307025.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM96044v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03372545
Country Austria
Date 2015-3-23
Genbank Assembly Accession GCA_000960445.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source food processing environment
Latitude Longitude 48.12 N 16.22 E
Molecule Count 1
CDS Count 3,007
Refseq Category na
Seq Rel Date 2015/03/23
Spanned Gaps 0
Species Taxid 1639
SSU Count 3
Submitter University of Veterinary Medicine Vienna
Taxid 1639
Total Gap Length 0
Translation Table 11
tRNA Count (total) 63
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JYOJ00000000.1