Listeria monocytogenes_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes_B
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers 15KSM
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000307025.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.46%
CheckM Strain Heterogeneity 100.0
5S Count 4
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 41
N50 Contigs 157,231 bp
Longest Contig 308,941 bp
Scaffold Count 41
N50 Scaffolds 157,231 bp
Longest Scaffold 308,941 bp
Genome Size 2,914,611 bp
Protein Count 2,894
Coding Density 89.95%
GC Percentage 37.89%
Ambiguous Bases 18
GTDB representative GCA_000307025.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM96015v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03378822
Country Austria
Date 2015-3-23
Genbank Assembly Accession GCA_000960155.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source food processing environment
Latitude Longitude 48.12 N 16.22 E
Molecule Count N/A
CDS Count 2,927
Refseq Category na
Seq Rel Date 2015/03/23
Spanned Gaps 0
Species Taxid 1639
SSU Count 2
Submitter University of Veterinary Medicine Vienna
Taxid 1639
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JYOT00000000.1