Enterobacter himalayensis
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter himalayensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter hormaechei
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; x__Enterobacter cloacae complex; s__Enterobacter hormaechei
NCBI Strain Identifiers MNCRE9
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002003685.1)
Genome Characteristics
CheckM Completeness 99.66%
CheckM Contamination 0.79%
CheckM Strain Heterogeneity 20.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 72
N50 Contigs 214,669 bp
Longest Contig 417,256 bp
Scaffold Count 62
N50 Scaffolds 223,981 bp
Longest Scaffold 498,646 bp
Genome Size 4,908,651 bp
Protein Count 4,674
Coding Density 89.53%
GC Percentage 55.14%
Ambiguous Bases 18
GTDB representative GCA_002003685.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM95892v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03333181
Country USA: Minnesota
Date 2015-03-20
Genbank Assembly Accession GCA_000958925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sputum
Latitude Longitude 46 N 94 W
Molecule Count N/A
CDS Count 4,788
Refseq Category na
Seq Rel Date 2015/03/20
Spanned Gaps 10
Species Taxid 158836
SSU Count 1
Submitter University of Minnesota
Taxid 158836
Total Gap Length 917
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JZDE00000000.1