Enterobacter roggenkampii
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter roggenkampii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter roggenkampii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; x__Enterobacter cloacae complex; s__Enterobacter roggenkampii
NCBI Strain Identifiers 42192
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001729805.1)
Genome Characteristics
CheckM Completeness 99.07%
CheckM Contamination 0.8%
CheckM Strain Heterogeneity 28.57
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 95
N50 Contigs 231,425 bp
Longest Contig 497,388 bp
Scaffold Count 95
N50 Scaffolds 231,425 bp
Longest Scaffold 497,388 bp
Genome Size 5,086,655 bp
Protein Count 4,777
Coding Density 89.21%
GC Percentage 55.73%
Ambiguous Bases N/A
GTDB representative GCA_001729805.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM95842v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03283659
Country USA: NYC
Date 2015-03-19
Genbank Assembly Accession GCA_000958425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,904
Refseq Category na
Seq Rel Date 2015/03/19
Spanned Gaps 0
Species Taxid 1812935
SSU Count 1
Submitter JCVI
Taxid 1812935
Total Gap Length 0
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JZYJ00000000.1