Salmonella enterica
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Livingstone
NCBI Strain Identifiers CKY-S4
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 3
23S Count 7
tRNA Count 18
Contig Count 31
N50 Contigs 445,170 bp
Longest Contig 834,341 bp
Scaffold Count 31
N50 Scaffolds 445,170 bp
Longest Scaffold 834,341 bp
Genome Size 4,803,211 bp
Protein Count 4,451
Coding Density 87.60%
GC Percentage 52.09%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM95612v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03396344
Country Canada: Regina
Date 2015-3-18
Genbank Assembly Accession GCA_000956125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source surface of lake
Latitude Longitude 50.4325 N 104.6068 W
Molecule Count N/A
CDS Count 4,741
Refseq Category na
Seq Rel Date 2015/03/18
Spanned Gaps 0
Species Taxid 28901
SSU Count 7
Submitter University of Regina
Taxid 260680
Total Gap Length 0
Translation Table 11
tRNA Count (total) 75
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JZWK00000000.1