Renibacterium lacuslunae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Micrococcaceae; g__Renibacterium; s__Renibacterium lacuslunae
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Micrococcaceae; g__Psychromicrobium; s__Psychromicrobium lacuslunae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Micrococcaceae; g__Psychromicrobium; s__Psychromicrobium lacuslunae
NCBI Strain Identifiers IHBB 11108
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 2.06%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 2
N50 Contigs 3,595,718 bp
Longest Contig 3,595,718 bp
Scaffold Count 2
N50 Scaffolds 3,595,718 bp
Longest Scaffold 3,595,718 bp
Genome Size 3,599,434 bp
Protein Count 3,397
Coding Density 91.60%
GC Percentage 58.98%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM95057v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03366954
Country India:Chandra Tal lake at Lahual and Spiti
Date 2015-03-11
Genbank Assembly Accession GCA_000950575.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source water from surface of lake
Latitude Longitude 32.29 N 77.36 E
Molecule Count 2
CDS Count 3,341
Refseq Category na
Seq Rel Date 2015/03/11
Spanned Gaps 0
Species Taxid 1618207
SSU Count 2
Submitter CSIR-Institute of Himalayan Bioresource Technology
Taxid 1618207
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None