Photobacterium angustum
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Photobacterium; s__Photobacterium angustum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Photobacterium; s__Photobacterium angustum
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Photobacterium; s__Photobacterium angustum
NCBI Strain Identifiers GCSL-A2-4
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003026365.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.53%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 2
23S Count 2
tRNA Count 17
Contig Count 57
N50 Contigs 213,250 bp
Longest Contig 832,247 bp
Scaffold Count 57
N50 Scaffolds 213,250 bp
Longest Scaffold 832,247 bp
Genome Size 4,856,945 bp
Protein Count 4,461
Coding Density 84.99%
GC Percentage 39.55%
Ambiguous Bases N/A
GTDB representative GCA_003026365.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CFSAN029424_01.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03295472
Country USA:HI
Date 2015-3-10
Genbank Assembly Accession GCA_000950275.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source albacore tuna-anal vent
Latitude Longitude None
Molecule Count N/A
CDS Count 4,289
Refseq Category na
Seq Rel Date 2015/03/10
Spanned Gaps 0
Species Taxid 661
SSU Count 2
Submitter FDA/CFSAN
Taxid 661
Total Gap Length 0
Translation Table 11
tRNA Count (total) 77
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JZSX00000000.1