Ruthenibacterium lactatiformans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Oscillospirales; f__Ruminococcaceae; g__Ruthenibacterium; s__Ruthenibacterium lactatiformans
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Ruminococcaceae; g__Ruthenibacterium; s__Ruthenibacterium lactatiformans
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Ruminococcaceae; g__Ruthenibacterium; s__Ruthenibacterium lactatiformans
NCBI Strain Identifiers 585-1
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (16 genomes in species cluster)
Genome Characteristics
CheckM Completeness 97.28%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 108
N50 Contigs 101,736 bp
Longest Contig 406,627 bp
Scaffold Count 108
N50 Scaffolds 101,736 bp
Longest Scaffold 406,627 bp
Genome Size 4,111,078 bp
Protein Count 3,934
Coding Density 87.18%
GC Percentage 56.51%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM94945v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03323960
Country Russia: Moscow
Date 2015-3-10
Genbank Assembly Accession GCA_000949455.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source human feces
Latitude Longitude None
Molecule Count N/A
CDS Count 3,982
Refseq Category representative genome
Seq Rel Date 2015/03/10
Spanned Gaps 0
Species Taxid 1550024
SSU Count 1
Submitter Pirogov Russian National Research Medical University
Taxid 1550024
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JXXK00000000.1