Campylobacter_D jejuni
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D jejuni
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni; sb__Campylobacter jejuni subsp. jejuni
NCBI Strain Identifiers C2-5524
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457695.1)
Genome Characteristics
CheckM Completeness 99.25%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 78
N50 Contigs 87,990 bp
Longest Contig 183,591 bp
Scaffold Count 78
N50 Scaffolds 87,990 bp
Longest Scaffold 183,591 bp
Genome Size 1,740,321 bp
Protein Count 1,852
Coding Density 93.15%
GC Percentage 30.27%
Ambiguous Bases 10
GTDB representative GCA_001457695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM94809v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03296060
Country Japan:Tokachi area; Obihiro
Date 2015-3-5
Genbank Assembly Accession GCA_000948095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 43.41 N 142.69 E
Molecule Count N/A
CDS Count 1,824
Refseq Category na
Seq Rel Date 2015/03/05
Spanned Gaps 0
Species Taxid 197
SSU Count 1
Submitter Laboratory of Food microbiology and Immunology
Taxid 32022
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JXTR00000000.1