Streptococcus suis_W
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis_W
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
NCBI Strain Identifiers S16A
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_004922915.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 161
N50 Contigs 53,511 bp
Longest Contig 143,137 bp
Scaffold Count 161
N50 Scaffolds 53,511 bp
Longest Scaffold 143,137 bp
Genome Size 2,145,858 bp
Protein Count 2,149
Coding Density 87.54%
GC Percentage 41.00%
Ambiguous Bases N/A
GTDB representative GCA_004922915.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Velvet_assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3234022
Country United Kingdom
Date 2015-2-18
Genbank Assembly Accession GCA_000946835.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Lung
Latitude Longitude None
Molecule Count N/A
CDS Count 2,157
Refseq Category na
Seq Rel Date 2015/02/18
Spanned Gaps 0
Species Taxid 1307
SSU Count 1
Submitter UNIVERSITY OF CAMBRIDGE
Taxid 1307
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CEKS00000000.1