Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis_P
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
NCBI Strain Identifiers LS6D
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002831545.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 50.0
5S Count 0
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 331
N50 Contigs 38,787 bp
Longest Contig 148,706 bp
Scaffold Count 331
N50 Scaffolds 38,787 bp
Longest Scaffold 148,706 bp
Genome Size 2,429,653 bp
Protein Count 2,482
Coding Density 87.65%
GC Percentage 41.57%
Ambiguous Bases N/A
GTDB representative GCA_002831545.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Velvet_assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3233932
Country United Kingdom
Date 2015-2-17
Genbank Assembly Accession GCA_000944335.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Unknown
Latitude Longitude None
Molecule Count N/A
CDS Count 2,403
Refseq Category na
Seq Rel Date 2015/02/17
Spanned Gaps 0
Species Taxid 1307
SSU Count 1
Submitter UNIVERSITY OF CAMBRIDGE
Taxid 1307
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CEEO00000000.1