Tamlana_B sedimentorum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Tamlana_B; s__Tamlana_B sedimentorum
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Tamlana; s__Tamlana sedimentorum
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Tamlana; s__Tamlana sedimentorum
NCBI Strain Identifiers JCM 19808
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.01%
CheckM Contamination 1.32%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 52
N50 Contigs 437,270 bp
Longest Contig 618,732 bp
Scaffold Count 52
N50 Scaffolds 437,270 bp
Longest Scaffold 618,732 bp
Genome Size 3,961,353 bp
Protein Count 3,406
Coding Density 91.51%
GC Percentage 32.91%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM94356v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03198753
Country Pacific Ocean: Sea of Japan; seashore
Date 2015-03-04
Genbank Assembly Accession GCA_000943565.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source marine sand sediment sample
Latitude Longitude None
Molecule Count N/A
CDS Count 3,348
Refseq Category na
Seq Rel Date 2015/03/04
Spanned Gaps 0
Species Taxid 1435349
SSU Count 1
Submitter Third Institute of Oceanography, State Oceanic Administration
Taxid 1435349
Total Gap Length 0
Translation Table 11
tRNA Count (total) 39
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JTDW00000000.1