Propionibacterium freudenreichii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Propionibacteriaceae; g__Propionibacterium; s__Propionibacterium freudenreichii
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Propionibacteriales; f__Propionibacteriaceae; g__Propionibacterium; s__Propionibacterium freudenreichii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Propionibacteriales; f__Propionibacteriaceae; g__Propionibacterium; s__Propionibacterium freudenreichii; sb__Propionibacterium freudenreichii subsp. freudenreichii
NCBI Strain Identifiers DSM 20271
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (41 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.79%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 2,649,166 bp
Longest Contig 2,649,166 bp
Scaffold Count 1
N50 Scaffolds 2,649,166 bp
Longest Scaffold 2,649,166 bp
Genome Size 2,649,166 bp
Protein Count 2,320
Coding Density 87.74%
GC Percentage 67.34%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM94084v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03263638
Country Switzerland: Bern
Date 2015-3-4
Genbank Assembly Accession GCA_000940845.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Emmental cheese
Latitude Longitude None
Molecule Count 1
CDS Count 2,280
Refseq Category representative genome
Seq Rel Date 2015/03/04
Spanned Gaps 0
Species Taxid 1744
SSU Count 2
Submitter University of Helsinki
Taxid 66712
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None