Citrobacter freundii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter freundii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter freundii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; x__Citrobacter freundii complex; s__Citrobacter freundii
NCBI Strain Identifiers MRSN 11938
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900635425.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.44%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 7
23S Count 8
tRNA Count 20
Contig Count 56
N50 Contigs 1,228,041 bp
Longest Contig 2,761,647 bp
Scaffold Count 16
N50 Scaffolds 4,291,073 bp
Longest Scaffold 4,291,073 bp
Genome Size 5,763,242 bp
Protein Count 5,578
Coding Density 87.98%
GC Percentage 51.38%
Ambiguous Bases N/A
GTDB representative GCA_900635425.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM93745v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03316839
Country USA
Date 2015-4-7
Genbank Assembly Accession GCA_000937455.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Surveillance Swab
Latitude Longitude None
Molecule Count 2
CDS Count 5,753
Refseq Category na
Seq Rel Date 2015/04/07
Spanned Gaps 40
Species Taxid 546
SSU Count 7
Submitter Walter Reed Army Institute of Research
Taxid 546
Total Gap Length 7642
Translation Table 11
tRNA Count (total) 85
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JYFY00000000.2