Escherichia dysenteriae
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia dysenteriae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
NCBI Strain Identifiers ATCC 35150
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002949675.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 242
N50 Contigs 58,735 bp
Longest Contig 202,085 bp
Scaffold Count 242
N50 Scaffolds 58,735 bp
Longest Scaffold 202,085 bp
Genome Size 5,303,239 bp
Protein Count 5,158
Coding Density 87.72%
GC Percentage 50.42%
Ambiguous Bases N/A
GTDB representative GCA_002949675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM93486v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03322683
Country USA
Date 2015-2-26
Genbank Assembly Accession GCA_000934865.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source fecal material
Latitude Longitude None
Molecule Count N/A
CDS Count 5,616
Refseq Category na
Seq Rel Date 2015/02/26
Spanned Gaps 0
Species Taxid 562
SSU Count 2
Submitter Canadian Food Inspection Agency
Taxid 562
Total Gap Length 0
Translation Table 11
tRNA Count (total) 88
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JXUS00000000.1