Aeromonas salmonicida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida; sb__Aeromonas salmonicida subsp. salmonicida
NCBI Strain Identifiers JF3224
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 10
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 133
N50 Contigs 120,107 bp
Longest Contig 382,411 bp
Scaffold Count 133
N50 Scaffolds 120,107 bp
Longest Scaffold 382,411 bp
Genome Size 4,806,166 bp
Protein Count 4,682
Coding Density 86.36%
GC Percentage 58.44%
Ambiguous Bases 0
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM93198v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03295755
Country Switzerland
Date 2015-2-24
Genbank Assembly Accession GCA_000931985.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source wild brown trout fished in a prealpine river
Latitude Longitude None
Molecule Count 3
Protein Count 4,534
Refseq Category na
Seq Rel Date 2015/02/24
Spanned Gaps 0
Species Taxid 645
SSU Count 11
Submitter Universite Laval
Taxid 29491
Total Gap Length 0
Translation Table 11
tRNA Count (total) 104
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JXTA00000000.1