Paucilactobacillus wasatchensis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Paucilactobacillus; s__Paucilactobacillus wasatchensis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus wasatchensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus wasatchensis
NCBI Strain Identifiers WDC04
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 0.82%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 105
N50 Contigs 37,087 bp
Longest Contig 134,206 bp
Scaffold Count 105
N50 Scaffolds 37,087 bp
Longest Scaffold 134,206 bp
Genome Size 1,904,253 bp
Protein Count 1,862
Coding Density 86.68%
GC Percentage 39.80%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM87620v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03351325
Country None
Date 2015-2-17
Genbank Assembly Accession GCA_000876205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Aged cheddar cheese
Latitude Longitude None
Molecule Count N/A
CDS Count 1,834
Refseq Category representative genome
Seq Rel Date 2015/02/17
Spanned Gaps 0
Species Taxid 1335616
SSU Count 1
Submitter Utah State University
Taxid 1335616
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AWTT00000000.1