Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Lachnospirales; f__Lachnospiraceae; g__Anaerostipes; s__Anaerostipes hadrus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Lachnospiraceae; g__Anaerostipes; s__Anaerostipes hadrus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Lachnospiraceae; g__Anaerostipes; s__Anaerostipes hadrus
NCBI Strain Identifiers PEL 85
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000332875.2)
Genome Characteristics
CheckM Completeness 99.33%
CheckM Contamination 3.38%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 117
N50 Contigs 51,952 bp
Longest Contig 160,284 bp
Scaffold Count 117
N50 Scaffolds 51,952 bp
Longest Scaffold 160,284 bp
Genome Size 3,542,561 bp
Protein Count 3,547
Coding Density 89.10%
GC Percentage 36.57%
Ambiguous Bases N/A
GTDB representative GCA_000332875.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM87613v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03338996
Country Finland
Date 2015-2-17
Genbank Assembly Accession GCA_000876135.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,477
Refseq Category na
Seq Rel Date 2015/02/17
Spanned Gaps 0
Species Taxid 649756
SSU Count 1
Submitter Helsinki University
Taxid 649756
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JYFK00000000.1