Microbacterium foliorum_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium foliorum_A
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Microbacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium sp. MEJ108Y
NCBI Strain Identifiers MEJ108Y
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002024885.1)
Genome Characteristics
CheckM Completeness 99.43%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 43
N50 Contigs 143,866 bp
Longest Contig 596,739 bp
Scaffold Count 43
N50 Scaffolds 143,866 bp
Longest Scaffold 596,739 bp
Genome Size 3,669,952 bp
Protein Count 3,569
Coding Density 92.56%
GC Percentage 68.01%
Ambiguous Bases N/A
GTDB representative GCA_002024885.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM83417v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03267959
Country USA: Michigan State University Extension; Berrien County; Michigan
Date 2015-2-9
Genbank Assembly Accession GCA_000834175.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source leaf
Latitude Longitude 42.0927 N 86.356322 W
Molecule Count N/A
CDS Count 3,546
Refseq Category na
Seq Rel Date 2015/02/09
Spanned Gaps 0
Species Taxid 1587523
SSU Count 1
Submitter University of Chicago
Taxid 1587523
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JXQX00000000.1