Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio jasicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio harveyi
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio harveyi
NCBI Strain Identifiers BSW5
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000400365.1)
Genome Characteristics
CheckM Completeness 99.73%
CheckM Contamination 0.21%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 13
Contig Count 112
N50 Contigs 162,233 bp
Longest Contig 464,672 bp
Scaffold Count 112
N50 Scaffolds 162,233 bp
Longest Scaffold 464,672 bp
Genome Size 5,864,537 bp
Protein Count 5,283
Coding Density 87.30%
GC Percentage 45.11%
Ambiguous Bases N/A
GTDB representative GCA_000400365.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM83407v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03280971
Country France: Saint Malo
Date 2015-2-9
Genbank Assembly Accession GCA_000834075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Sea water
Latitude Longitude None
Molecule Count N/A
CDS Count 5,307
Refseq Category na
Seq Rel Date 2015/02/09
Spanned Gaps 0
Species Taxid 669
SSU Count 1
Submitter University of Malaya
Taxid 669
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JXIL00000000.1