Prevotella sp000834015
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Prevotella; s__Prevotella sp000834015
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella sp. P5-119
NCBI Strain Identifiers P5-119
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000834015.1)
Genome Characteristics
CheckM Completeness 99.26%
CheckM Contamination 0.49%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 7
tRNA Count 19
Contig Count 93
N50 Contigs 115,829 bp
Longest Contig 215,858 bp
Scaffold Count 93
N50 Scaffolds 115,829 bp
Longest Scaffold 215,858 bp
Genome Size 3,319,373 bp
Protein Count 2,697
Coding Density 85.35%
GC Percentage 47.48%
Ambiguous Bases N/A
GTDB representative GCA_000834015.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM83397v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03284263
Country Slovenia: Ihan; pig farm
Date 2015-2-9
Genbank Assembly Accession GCA_000833975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source feces
Latitude Longitude None
Molecule Count N/A
CDS Count 2,613
Refseq Category na
Seq Rel Date 2015/02/09
Spanned Gaps 0
Species Taxid 1602171
SSU Count 7
Submitter University of Ljubljana
Taxid 1602171
Total Gap Length 0
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JXQK00000000.1