Levilactobacillus brevis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Levilactobacillus; s__Levilactobacillus brevis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus brevis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus brevis
NCBI Strain Identifiers TMW 1.465
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001433855.1)
Genome Characteristics
CheckM Completeness 97.46%
CheckM Contamination 0.62%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 5
23S Count 4
tRNA Count 20
Contig Count 190
N50 Contigs 23,910 bp
Longest Contig 114,051 bp
Scaffold Count 33
N50 Scaffolds 527,469 bp
Longest Scaffold 1,066,911 bp
Genome Size 2,540,645 bp
Protein Count 2,499
Coding Density 81.04%
GC Percentage 45.91%
Ambiguous Bases 2
GTDB representative GCA_001433855.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM83339v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03144672
Country None
Date 2015-2-6
Genbank Assembly Accession GCA_000833395.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soft drink (brewery)
Latitude Longitude None
Molecule Count N/A
CDS Count 2,438
Refseq Category na
Seq Rel Date 2015/02/06
Spanned Gaps 157
Species Taxid 1580
SSU Count 2
Submitter Technische Universitaet Muenchen
Taxid 1580
Total Gap Length 87137
Translation Table 11
tRNA Count (total) 60
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JXUG00000000.1