Flavobacterium hibernum
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium hibernum
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium hibernum
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium hibernum
NCBI Strain Identifiers DSM 12611
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.65%
CheckM Contamination 0.14%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 30
N50 Contigs 300,918 bp
Longest Contig 550,880 bp
Scaffold Count 30
N50 Scaffolds 300,918 bp
Longest Scaffold 550,880 bp
Genome Size 5,283,672 bp
Protein Count 4,516
Coding Density 88.20%
GC Percentage 33.16%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM83212v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02934118
Country Antarctica
Date 2015-02-03
Genbank Assembly Accession GCA_000832125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source freshwater Antarctic lake
Latitude Longitude None
Molecule Count N/A
CDS Count 4,427
Refseq Category na
Seq Rel Date 2015/02/03
Spanned Gaps 0
Species Taxid 37752
SSU Count 1
Submitter GCAT-SEEK
Taxid 37752
Total Gap Length 0
Translation Table 11
tRNA Count (total) 57
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JPRK00000000.1