Gabonibacter massiliensis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Marinifilaceae; g__Gabonibacter; s__Gabonibacter massiliensis
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Porphyromonadaceae; g__Sanguibacteroides; s__Sanguibacteroides justesenii
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Porphyromonadaceae; g__Sanguibacteroides; s__Sanguibacteroides justesenii
NCBI Strain Identifiers OUH 334697
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 39
N50 Contigs 483,020 bp
Longest Contig 654,302 bp
Scaffold Count 39
N50 Scaffolds 483,020 bp
Longest Scaffold 654,302 bp
Genome Size 3,410,672 bp
Protein Count 2,846
Coding Density 90.29%
GC Percentage 42.02%
Ambiguous Bases 0
GTDB representative GCF_001487125.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name OUH334697_1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02906675
Country Denmark: Odense
Date 2015-2-3
Genbank Assembly Accession GCA_000832085.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude 55.3958 N 10.3886 E
Molecule Count 0
Protein Count 2,788
Refseq Category na
Seq Rel Date 2015/02/03
Spanned Gaps 0
Species Taxid 1547597
SSU Count 4
Submitter Odense University Hospital
Taxid 1547597
Total Gap Length 0
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JPIT00000000.1