Flavobacterium psychrophilum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium psychrophilum
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium psychrophilum
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium psychrophilum
NCBI Strain Identifiers v4-33
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002217405.1)
Genome Characteristics
CheckM Completeness 99.29%
CheckM Contamination 0.44%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1
N50 Contigs 2,699,386 bp
Longest Contig 2,699,386 bp
Scaffold Count 1
N50 Scaffolds 2,699,386 bp
Longest Scaffold 2,699,386 bp
Genome Size 2,699,386 bp
Protein Count 2,399
Coding Density 88.11%
GC Percentage 32.37%
Ambiguous Bases 28
GTDB representative GCA_002217405.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM83120v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02900764
Country Denmark
Date 2014-7-22
Genbank Assembly Accession GCA_000831205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source from Flavobacterium psychrophilum strain 950106-1/1
Latitude Longitude None
Molecule Count 1
CDS Count 2,383
Refseq Category na
Seq Rel Date 2014/07/22
Spanned Gaps 0
Species Taxid 96345
SSU Count 1
Submitter University of Copenhagen
Taxid 96345
Total Gap Length 0
Translation Table 11
tRNA Count (total) 39
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None