Escherichia flexneri
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia flexneri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
NCBI Strain Identifiers C41(DE3)
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002950215.1)
Genome Characteristics
CheckM Completeness 99.39%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 1
N50 Contigs 4,557,511 bp
Longest Contig 4,557,511 bp
Scaffold Count 1
N50 Scaffolds 4,557,511 bp
Longest Scaffold 4,557,511 bp
Genome Size 4,557,511 bp
Protein Count 4,269
Coding Density 87.69%
GC Percentage 50.83%
Ambiguous Bases N/A
GTDB representative GCA_002950215.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM83003v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03292179
Country Sweden
Date 2015-1-29
Genbank Assembly Accession GCA_000830035.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 4,581
Refseq Category na
Seq Rel Date 2015/01/29
Spanned Gaps 0
Species Taxid 562
SSU Count 7
Submitter Stockholm University
Taxid 562
Total Gap Length 0
Translation Table 11
tRNA Count (total) 85
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None