Escherichia flexneri
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia flexneri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli 1303
NCBI Strain Identifiers 1303
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002950215.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 4
N50 Contigs 4,948,797 bp
Longest Contig 4,948,797 bp
Scaffold Count 4
N50 Scaffolds 4,948,797 bp
Longest Scaffold 4,948,797 bp
Genome Size 5,156,928 bp
Protein Count 4,788
Coding Density 87.39%
GC Percentage 50.61%
Ambiguous Bases N/A
GTDB representative GCA_002950215.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM82998v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02949643
Country Germany: Hannover
Date 2015-1-29
Genbank Assembly Accession GCA_000829985.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source udder acute mastitis
Latitude Longitude None
Molecule Count 4
CDS Count 5,160
Refseq Category na
Seq Rel Date 2015/01/29
Spanned Gaps 0
Species Taxid 562
SSU Count 7
Submitter Georg-August-University Goettingen
Taxid 745156
Total Gap Length 0
Translation Table 11
tRNA Count (total) 90
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None