GJ-E10 sp000828975
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__GJ-E10; s__GJ-E10 sp000828975
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; x__unclassified Burkholderiales; x__unclassified Burkholderiales (miscellaneous); s__Burkholderiales bacterium GJ-E10
NCBI Strain Identifiers GJ-E10
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.38%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1
N50 Contigs 3,276,549 bp
Longest Contig 3,276,549 bp
Scaffold Count 1
N50 Scaffolds 3,276,549 bp
Longest Scaffold 3,276,549 bp
Genome Size 3,276,549 bp
Protein Count 3,096
Coding Density 91.00%
GC Percentage 66.30%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM82897v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00020950
Country Japan: Akita Prefecture; Semboku city
Date 2014-11-15
Genbank Assembly Accession GCA_000828975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sediment
Latitude Longitude None
Molecule Count 1
CDS Count 3,053
Refseq Category na
Seq Rel Date 2014/11/15
Spanned Gaps 0
Species Taxid 1469502
SSU Count 1
Submitter Akita Prefectural University
Taxid 1469502
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None