Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Mycoplasmatales; f__Mycoplasmoidaceae; g__Ureaplasma; s__Ureaplasma parvum
Filtered NCBI Taxonomy d__Bacteria; p__Tenericutes; c__Mollicutes; o__Mycoplasmatales; f__Mycoplasmataceae; g__Ureaplasma; s__Ureaplasma parvum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Tenericutes; c__Mollicutes; o__Mycoplasmatales; f__Mycoplasmataceae; g__Ureaplasma; s__Ureaplasma parvum; x__Ureaplasma parvum serovar 3
NCBI Strain Identifiers SV3F4
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000019345.1)
Genome Characteristics
CheckM Completeness 98.33%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 727,289 bp
Longest Contig 727,289 bp
Scaffold Count 1
N50 Scaffolds 727,289 bp
Longest Scaffold 727,289 bp
Genome Size 727,289 bp
Protein Count 588
Coding Density 91.00%
GC Percentage 25.55%
Ambiguous Bases N/A
GTDB representative GCA_000019345.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM82873v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00000347
Country Japan
Date 2014-4-28
Genbank Assembly Accession GCA_000828735.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Vaginal swab
Latitude Longitude 34.40 N 135.30 E
Molecule Count 1
CDS Count 583
Refseq Category na
Seq Rel Date 2014/04/28
Spanned Gaps 0
Species Taxid 134821
SSU Count 2
Submitter GIRC
Taxid 38504
Total Gap Length 0
Translation Table 4
tRNA Count (total) 30
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None