Winogradskyella sp000828715
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Winogradskyella; s__Winogradskyella sp000828715
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Winogradskyella; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Winogradskyella; s__Winogradskyella sp. PG-2
NCBI Strain Identifiers PG-2
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.67%
CheckM Contamination 0.54%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 3,811,479 bp
Longest Contig 3,811,479 bp
Scaffold Count 1
N50 Scaffolds 3,811,479 bp
Longest Scaffold 3,811,479 bp
Genome Size 3,811,479 bp
Protein Count 3,492
Coding Density 91.31%
GC Percentage 32.18%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM82871v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00000346
Country Japan:Sagami Bay
Date 2014-5-7
Genbank Assembly Accession GCA_000828715.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Marine Agar 2216
Latitude Longitude 35.00 N 139.20 E
Molecule Count 1
CDS Count 3,397
Refseq Category na
Seq Rel Date 2014/05/07
Spanned Gaps 0
Species Taxid 754409
SSU Count 2
Submitter Atmosphere and Ocean Research Institute, Univ. Tokyo
Taxid 754409
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None