Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus safensis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus safensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus safensis
NCBI Strain Identifiers B4129
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000691165.1)
Genome Characteristics
CheckM Completeness 99.59%
CheckM Contamination 0.62%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 43
N50 Contigs 537,764 bp
Longest Contig 863,602 bp
Scaffold Count 23
N50 Scaffolds 652,664 bp
Longest Scaffold 864,560 bp
Genome Size 3,671,348 bp
Protein Count 3,766
Coding Density 88.41%
GC Percentage 41.50%
Ambiguous Bases N/A
GTDB representative GCA_000691165.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM82837v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03267270
Country Netherlands
Date 2015-01-26
Genbank Assembly Accession GCA_000828375.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source milk; fermented dairy products and desserts
Latitude Longitude None
Molecule Count N/A
CDS Count 3,740
Refseq Category na
Seq Rel Date 2015/01/26
Spanned Gaps 20
Species Taxid 561879
SSU Count 2
Submitter University of Groningen
Taxid 561879
Total Gap Length 1106
Translation Table 11
tRNA Count (total) 63
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JXCM00000000.1