Rickettsia hoogstraalii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; g__Rickettsia; s__Rickettsia hoogstraalii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; g__Rickettsia; s__Rickettsia hoogstraalii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; x__Rickettsieae; g__Rickettsia; x__spotted fever group; s__Rickettsia hoogstraalii
NCBI Strain Identifiers Croatica
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 2
N50 Contigs 1,444,049 bp
Longest Contig 1,444,049 bp
Scaffold Count 2
N50 Scaffolds 1,444,049 bp
Longest Scaffold 1,444,049 bp
Genome Size 1,484,812 bp
Protein Count 1,592
Coding Density 82.79%
GC Percentage 32.38%
Ambiguous Bases 1
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Rickettsia hoogstraalii Croatica
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2771239
Country None
Date 2014-9-23
Genbank Assembly Accession GCA_000825685.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,620
Refseq Category na
Seq Rel Date 2014/09/23
Spanned Gaps 0
Species Taxid 467174
SSU Count 1
Submitter URMITE
Taxid 467174
Total Gap Length 0
Translation Table 11
tRNA Count (total) 33
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master CCXM00000000.1