Borrelia recurrentis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Spirochaetia; o__Borreliales; f__Borreliaceae; g__Borrelia; s__Borrelia recurrentis
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Spirochaetales; f__Borreliaceae; g__Borrelia; s__Borrelia crocidurae
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Spirochaetales; f__Borreliaceae; g__Borrelia; s__Borrelia crocidurae
NCBI Strain Identifiers 03-02
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000019685.1)
Genome Characteristics
CheckM Completeness 99.19%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 137
N50 Contigs 13,697 bp
Longest Contig 38,719 bp
Scaffold Count 1
N50 Scaffolds 920,157 bp
Longest Scaffold 920,157 bp
Genome Size 920,157 bp
Protein Count 865
Coding Density 88.72%
GC Percentage 27.74%
Ambiguous Bases 189
GTDB representative GCA_000019685.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Borrelia crocidurae str. 03-02
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2768622
Country None
Date 2014-09-18
Genbank Assembly Accession GCA_000825665.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 835
Refseq Category na
Seq Rel Date 2014/09/18
Spanned Gaps 136
Species Taxid 29520
SSU Count 1
Submitter URMITE
Taxid 29520
Total Gap Length 7354
Translation Table 11
tRNA Count (total) 32
Type Material assembly designated as reftype
Unspanned Gaps 0
Version Status latest
WGS Master CCXD00000000.1