Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas citri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas citri
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; x__Xanthomonas citri group; s__Xanthomonas citri; x__Xanthomonas citri pv. citri
NCBI Strain Identifiers NCPPB 3607
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002019225.1)
Genome Characteristics
CheckM Completeness 97.52%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 432
N50 Contigs 28,575 bp
Longest Contig 96,428 bp
Scaffold Count 93
N50 Scaffolds 5,037,394 bp
Longest Scaffold 5,037,394 bp
Genome Size 5,374,979 bp
Protein Count 4,682
Coding Density 83.49%
GC Percentage 64.73%
Ambiguous Bases N/A
GTDB representative GCA_002019225.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name XAC3607
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2827559
Country India
Date 2014-11-10
Genbank Assembly Accession GCA_000825345.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source C. aurantifolia
Latitude Longitude None
Molecule Count N/A
CDS Count 4,932
Refseq Category na
Seq Rel Date 2014/11/10
Spanned Gaps 339
Species Taxid 346
SSU Count 1
Submitter CIRAD
Taxid 611301
Total Gap Length 33900
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CDAT00000000.1