Legionella pneumophila
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
NCBI Strain Identifiers 12_4555
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000008485.1)
Genome Characteristics
CheckM Completeness 99.76%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 134
N50 Contigs 47,922 bp
Longest Contig 217,384 bp
Scaffold Count 27
N50 Scaffolds 336,849 bp
Longest Scaffold 751,742 bp
Genome Size 3,342,066 bp
Protein Count 2,978
Coding Density 87.25%
GC Percentage 38.22%
Ambiguous Bases N/A
GTDB representative GCA_000008485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 12_4555
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2627155
Country United Kingdom:Scotland
Date 2014-10-21
Genbank Assembly Accession GCA_000823565.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Patient
Latitude Longitude None
Molecule Count N/A
CDS Count 2,994
Refseq Category na
Seq Rel Date 2014/10/21
Spanned Gaps 107
Species Taxid 446
SSU Count 1
Submitter ROSLIN
Taxid 446
Total Gap Length 3784
Translation Table 11
tRNA Count (total) 41
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CCZL00000000.1